PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053572.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 397aa    MW: 43720.9 Da    PI: 6.3218
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.7e-09267315355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i++++  L++l+P +    sk   Ka +L + ++Y+ sLq
  XP_028053572.1 267 NSHSLAERVRREKIRERMKFLQDLVPGC----SKITGKAVMLDEIINYVLSLQ 315
                     58**************************....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
METSGNGESG PENRGGGLLD CSSLGNFKPL TSDKVLGMTV GSEPLYKHWN APNSSFSGGW  60
TPQNAEIVNS LMSSHNQIDS FSYTDSLLQS RGTDSTSRLV QFQSDQCLAE LEPNLPCFGG  120
GSFAEIDNFS ILSRCRWISN SSCSVDSINK SNIALMSQSE ADNYAQSPED CKVLEEGAMK  180
PSPDGKKRKR DYDDWSQFAR LENMKTEQEK DQCNRQQDEA KPKPKQKAVA NTCAQVVGKE  240
VKDSSTSGDA PKEDYVHVRA KRGQATNSHS LAERVRREKI RERMKFLQDL VPGCSKITGK  300
AVMLDEIINY VLSLQQQVEF LSMKLATVYP ETNAEHEQIL SRDIHHSQGS SAAILGELGM  360
SSYRKEILQG ALLATKTSNL ESLTMSNLLT GAKHMGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-52bHLH family protein