PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053573.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 393aa    MW: 43724.9 Da    PI: 5.3327
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-09231279355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i++++  L++l+P +    sk   Ka +L + ++Y+ sLq
  XP_028053573.1 231 NSHSLAERVRREKIRERMKFLQDLVPGC----SKITGKAVMLDEIINYVLSLQ 279
                     58**************************....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
METSGNGESG PENRGGGLLD CSSLGNFKPL TSDKVLGMTV GSEPLYKHWN APNSSFSGGW  60
TPQNAEIVNS LMSSHNQIDS FSYTDSLLQS RGTDSTSRLV QFQSDQCLAE LEPNLPCFGG  120
GSFAEIDNFS ILKDCKVLEE GAMKPSPDGK KRKRDYDDWS QFARLENMKT EQEKDQCNRQ  180
QDEAKPKPKQ KAVANTCAQV VGKEVKDSST SGDAPKEDYV HVRAKRGQAT NSHSLAERVR  240
REKIRERMKF LQDLVPGCSK ITGKAVMLDE IINYVLSLQQ QVEFLSMKLA TVYPETNAEH  300
EQILSRDIHH SQGSSAAILG ELGMSSYRKE ILQGALLATK TSNLESLTMS NVPNIWENEL  360
HNISQIDFIS DLAPENLESN GRFQNLIFLY IFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-55bHLH family protein