PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053638.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YB
Protein Properties Length: 208aa    MW: 21929.1 Da    PI: 6.5112
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.33.9e-5721116297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplkvyl ++r++ege
  XP_028053638.1  21 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLLRFRDMEGE 115
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_028053638.1 116 K 116
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MADSDNESGG HNNSNSELSP REQDRFLPIA NVSRIMKKAL PANAKISKDA KETVQECVSE  60
FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFEEYVE PLKVYLLRFR DMEGEKTAMA  120
GRQGGDSGGD GGGGVSGSVV NYGNSGVGFG EGGLYGGMAS NAMMMGHQHH QGHVYGGSGG  180
YHHQMGSGGG HKIGSGYPGS GSSDGRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-69NF-YB family protein