PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053667.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SBP

Protein Properties

Length: 209aa MW: 23251.7 Da PI: 9.5036

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.7	2.6e-41	82	159	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+Ceadl+eak+y+rrhkvCe h+ka++++v+gl+qrfCqqCsrfhelsefD++krsCrrrLa+hnerrrk+++ XP_028053667.1 82 RCQAEKCEADLTEAKRYYRRHKVCELHAKATAAIVAGLRQRFCQQCSRFHELSEFDDTKRSCRRRLAGHNERRRKSSS 159 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MDSRRPNPSS LSKQKSDDFA PDDDDDSVEE EDENYASEFG ISSEKGGLKK KNKKKKVKVG 60 FDGGSGKKRG GGGGGLLSSP PRCQAEKCEA DLTEAKRYYR RHKVCELHAK ATAAIVAGLR 120 QRFCQQCSRF HELSEFDDTK RSCRRRLAGH NERRRKSSSE SPHGGGEGCS SQRLGSELNE 180 NHCSRQADDR GRTLIAFPGN PTYKQFHIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	8e-40	SBP family protein