PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053744.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 190aa    MW: 21599 Da    PI: 7.4482
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.23.7e-181055148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg++++eE+e+++++++ lG++ W++ a+ ++ gRt++++k++w++yl
   XP_028053744.1 10 RGNFSKEEEEIIINLHESLGNR-WSAMAAQLP-GRTDNDIKNHWHSYL 55
                     89********************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MNYLRPNIKR GNFSKEEEEI IINLHESLGN RWSAMAAQLP GRTDNDIKNH WHSYLKKRSS  60
RISISQGKKL SSGDRSKCKS NRQKKSEVKN SSSNPSTQQI FESYQSSPPS LSTKFRCLAI  120
DTTEGNCTSF VSPSEMFAET SGDFWTEPFL ADNYDATYDV MTPLVDNTGF LSPHFSTINE  180
EFLCSYGFYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.24e-30MYB_related family protein