PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053755.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 235aa MW: 26832.1 Da PI: 5.6167

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.3	1.4e-14	48	135	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY +YAk++GF v ++++ ++ge+ C++ k++++++ + +++ ++ ++Ckak++ ++++dg++++t+++leH+H+l p XP_028053755.1 48 SFYAKYAKHLGFAVAYRTQNIG-QDGEVNYFGIECTRACKKTKRSEV--HPLEPSLSSFIECKAKVRATLQTDGRFKLTTVVLEHTHDLIP 135 5***********99988876.8999**********999877..9999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDIDSTNPSL NGSEEVEETE NNPSLNEIGE VEEPKKGMCF SSKQEVYSFY AKYAKHLGFA 60 VAYRTQNIGQ DGEVNYFGIE CTRACKKTKR SEVHPLEPSL SSFIECKAKV RATLQTDGRF 120 KLTTVVLEHT HDLIPSDSRH FAMNKRILTF VKRRLEINDE AGIRVARNFH SIVIEAGGYE 180 ALTFDEQDAW NHIQSMRRLR LGVGDAESVA LYFHRMQQQN SNFYYAIDLD EDGCM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-20	FAR1 family protein