PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053907.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 243aa    MW: 26719.2 Da    PI: 6.6854
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053907.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-18130181155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GVr+++ +g+++AeIrdp   + k  r++lg+f+ a eAa+a++ a+ k++g
  XP_028053907.1 130 SHYRGVRRRP-WGKFAAEIRDP---NrKGCRVWLGTFDAAVEAARAYDCAAFKMRG 181
                     79********.**********9...5466*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MTATATDDEL VLERIRQHLL GEFTSTQSFI TNLNFSNSSH HHDSILDIKP IFSSQKSDLS  60
VSSSGSGSDS NSNSNSSLIY LNPDLDFSDY ESKPEIADLS PSLNVSVQKL KTNESGSGPS  120
GLNGDEAERS HYRGVRRRPW GKFAAEIRDP NRKGCRVWLG TFDAAVEAAR AYDCAAFKMR  180
GSKAILNFPL DAGKSDPPVS TGRKRWSEGG AERSEERRRR ESDSSRRNVT TYSDGDGVFN  240
GVM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203220RKRWSEGGAERSEERRRR
2216221ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.17e-40ERF family protein