PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028053921.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 471aa MW: 54289.9 Da PI: 7.1546

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028053921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.2	1.1e-07	32	67	2	38
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCske 38 fYn+YAk GFs+rks+ +++k +g++++r + Cs+e XP_028053921.1 32 FYNAYAKAKGFSIRKSRFNTNK-EGKVVTRLWLCSRE 67 9****************99995.55588888899998 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MVDDAHRNDM VGDVERAILE QKFDLVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVTR 60 LWLCSREDAG EGGKYVVTHF VVDHNHELAE QHCVMYLRLH HSLNSADKAQ AMAMHNVGVK 120 TSQIMDYMVN QSGSYENVGF IRTDLHNHIQ AERRVEVEDG DEQDSKSWAD YAKFGDVLIF 180 DSTYRTNAYK KPFVMLAGVT SHFRTTIFAC VLLANETSET YTWVLETFIE AMGNKAPVSV 240 LTDGDKAMRK AIRKVFPDAR HRLCNWHLGK NVVSNVHISG FAHAFKQCMD MKMDETNFEH 300 GWTTMVEKFG HQTNSWVLET YEKRHMHYDR ALARIRYNEA GDDAETNNTF PVLITPLRDI 360 GRHGAELFTR NIFRMFHDEI LEEGKLNVKD VFPLLDGQKC YYIHKYKLKD RSWIITHSPV 420 DATMRCSCMK FESLGLPCCH MICVMKVENL MQIPPTCVLH RWTRAASKDG Q

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MVDDAHRNDM VGDVERAILE QKFDLVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVTR  60
LWLCSREDAG EGGKYVVTHF VVDHNHELAE QHCVMYLRLH HSLNSADKAQ AMAMHNVGVK  120
TSQIMDYMVN QSGSYENVGF IRTDLHNHIQ AERRVEVEDG DEQDSKSWAD YAKFGDVLIF  180
DSTYRTNAYK KPFVMLAGVT SHFRTTIFAC VLLANETSET YTWVLETFIE AMGNKAPVSV  240
LTDGDKAMRK AIRKVFPDAR HRLCNWHLGK NVVSNVHISG FAHAFKQCMD MKMDETNFEH  300
GWTTMVEKFG HQTNSWVLET YEKRHMHYDR ALARIRYNEA GDDAETNNTF PVLITPLRDI  360
GRHGAELFTR NIFRMFHDEI LEEGKLNVKD VFPLLDGQKC YYIHKYKLKD RSWIITHSPV  420
DATMRCSCMK FESLGLPCCH MICVMKVENL MQIPPTCVLH RWTRAASKDG Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-65	FAR1 family protein