PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028053954.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 274aa    MW: 31161.7 Da    PI: 9.6158
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028053954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.71.6e-0763148888
            FAR1   8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                     ++ GF +++++s +    +++ +  + C ++g+ + +kk      ++k  + + ++++gC  +l+ +k   d+ w+v+     HnH+
  XP_028053954.1  63 RKNGFVIVIKTSDYG-SGHRTPRIFLACERSGQYRAHKKLegddsSKKIVKITGTKKCGCPFELRARKLMaDDDWMVDVACGMHNHA 148
                     788******999988.45557888899*****999888877876666667788889999999999988777***************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MDSMKDAYGN FDSQQWSKEG NDASVKCSNV GSGGFVDYTS QFITNEVFKS KGELLGWVRN  60
VGRKNGFVIV IKTSDYGSGH RTPRIFLACE RSGQYRAHKK LEGDDSSKKI VKITGTKKCG  120
CPFELRARKL MADDDWMVDV ACGMHNHAPA KHFEGHSFAG RLSKEETSLL VDMSKSMVRP  180
KEILVTSKRK DALNVTTMKT IYNVRHRNNV IEKAGRSQMQ HLLGELEKHN YIEWHRCANN  240
TMIVTDLFWA YPVSLDLFRS FPKVLIMDCT YKTN