PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054076.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 90aa    MW: 10343.8 Da    PI: 10.031
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.24.7e-21283783
                    .-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
              B3  7 psdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83
                     sd++++g +++ +k+a+e+       ++  + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF 
  XP_028054076.1  2 ASDTSTHGGFSVLRKHANEClpqldmtQS--TPTQDLVAKDLHGHEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVVGDAFVFL 83
                    799*******************9996444..44558***********************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MASDTSTHGG FSVLRKHANE CLPQLDMTQS TPTQDLVAKD LHGHEWRFKH IFRGQPRRHL  60
LTTGWSTFVT SKRLVVGDAF VFLRYSILDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.24e-52ARF family protein