PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054239.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 165aa    MW: 18114.9 Da    PI: 4.8841
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.42.2e-11128147322
                     -SS-EEEEEEE--TT-SS-E CS
            WRKY   3 DgynWrKYGqKevkgsefpr 22 
                     Dgy+WrKYGqK+vkg+++pr
  XP_028054239.1 128 DGYRWRKYGQKMVKGNPHPR 147
                     9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MGLKLLLDNT YIHVDLQETE EMIANVLGVE VFRQTIAGNI LVGSYCAFSN KGGLVHPYTS  60
IEDLDELSTL LQVPLVAGTV NRGSEVIAAG LTVNDCTAFC GSNTTATELS VIESVFKLRD  120
GDLGISGDGY RWRKYGQKMV KGNPHPRYVP IFQFNLLILY LIFVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.13e-14WRKY family protein