PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054259.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 100aa    MW: 11406.7 Da    PI: 9.549
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.22.8e-111458344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+++ +l+ +a +q+ ++   +W+ Iar +g g++++++k ++
   XP_028054259.1 14 SWTPQLNKLFEQALAQYDKDtpdRWHNIARAVGGGKSAEEVKRHY 58
                     7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MASSSLSSRR SLSSWTPQLN KLFEQALAQY DKDTPDRWHN IARAVGGGKS AEEVKRHYDI  60
LLEDLRRIES GRVPIPNYRS NANADEERRY LGPIGFWAST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.13e-33MYB_related family protein