PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054417.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

LBD

Protein Properties

Length: 233aa MW: 25756.7 Da PI: 7.4372

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	142.3	1.5e-44	14	113	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC ++Cv+apyfpae+p+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql ql+ +l XP_028054417.1 14 PCAACKFLRRKCLPECVFAPYFPAEHPQKFANVHKVFGASNVTKLLNELQPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLLQLQIDLT 108 7*********************************************************************************************9 PP DUF260 96 llkee 100 +k+e XP_028054417.1 109 CAKSE 113 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MAMTSSSSSS NLPPCAACKF LRRKCLPECV FAPYFPAEHP QKFANVHKVF GASNVTKLLN 60 ELQPHQREDA VNSLAYEADM RLRDPVYGCV GVISLLQHQL LQLQIDLTCA KSELSKYHHH 120 QNLGFTGGGG SSGDGDGGGS GGSLDHHHYH HHQFFPRSNN QQQHQEQVMR TRFDVGNNNV 180 VYEYDVNSLF AMNVSPTASI GGQLNHQFQQ QPRATVRAAT ASEDDWRKAI GPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	4e-61	LBD family protein