PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054482.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 279aa    MW: 32104.1 Da    PI: 6.1818
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.81.5e-1237110278
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 
                     fY +YAk+vGFs+  ++++   ++g+ ++    Cs+egkr+++++   +  +++ +t++gCka+ k++ +++++  v
  XP_028054482.1  37 FYGKYAKHVGFSIAHRAQHFG-DDGQLKNFAIECSREGKRKKKSEV--NPLKPSLSTKIGCKARRKLEINDQARIGV 110
                     9*************9988776.8999***************98866..999************99998887766555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEIDSNVGDN PSINEGEEVE EPKKSVCFSS REEMYTFYGK YAKHVGFSIA HRAQHFGDDG  60
QLKNFAIECS REGKRKKKSE VNPLKPSLST KIGCKARRKL EINDQARIGV SSNFHSMVVE  120
AGGYESLTFD ERDARNYIER ARKLRLGEGD VESLQNYFMK MQTHSERFFY IIDVNEEFHI  180
RNVFWADARS WVTYEAFGDI VSFDTTYLTN KYDMPFALFI GVNYHGQSIL LGCGLLPSES  240
NDTFKIPEKL KGYAQYEAIK LAMQNAVYDC LTRVEFENK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.13e-36FAR1 family protein