PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054490.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 349aa    MW: 38555.4 Da    PI: 6.4155
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000432112491255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_028054490.1 211 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 249
                     6678889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MNQGVLQSSP VQQMVAGGPN WWNMNSMRPP SQQSSPFLPP VPNLFPHFTP PPISSWHDNQ  60
DLPESWSQLL LGGLVGEEEK SGLSLTHIQA KKLENWEEQL LQQAPNAPSV EIKQENSPCS  120
YVYGHGNANV DYQTTAKPTW SQMMIASYPK SCVTTHLSDI NMLDFSNKKS DGRHPPPDRS  180
SEGNSTATGG MVLKKARVHQ PCSTQSTFKV RKEKLGDRIT SLHQLVSPFG KTDTASVLLE  240
AIGYIRFLQS QIEVIIYVSS SSFYFFANYH EPVQGERNCL FPEDPGQLLN DNCMKRKGAS  300
EQDCEEPKDL RSRGLCLVPI SCTLQVGSDN GADYWAPAAA PPAFGGGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-74bHLH family protein