PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054573.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 140aa    MW: 16298.8 Da    PI: 9.4657
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.49.8e-2325114190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y  ++ Fs++++  +k+k +++  +r +vC+k+g+r+ +k++ + ++++ra trtgC+a+l vk+++ +gk++vt+++++ nH+l+
  XP_028054573.1  25 DFYNTYRGRMRFSIKRDFCRKNKITNQLSCRLLVCNKKGFRKGDKRD-TLSKNPRAATRTGCEARLYVKLDEgTGKYVVTDFKEKYNHDLV 114
                     6*******************************************999.99***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MELENDCAWK PKQGMPFDSE QCVYDFYNTY RGRMRFSIKR DFCRKNKITN QLSCRLLVCN  60
KKGFRKGDKR DTLSKNPRAA TRTGCEARLY VKLDEGTGKY VVTDFKEKYN HDLVSPECAH  120
MLPLQRKIST TQAIELDLAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-19FAR1 family protein