PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054599.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 464aa MW: 53491.4 Da PI: 7.7982

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.2	4.9e-22	67	161	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 +fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr++Cka+++++ + gk++vt+++ +HnHel XP_028054599.1 67 DFYNAYAKAKGFSIRKSRFNTN-KEGKVISRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVDCKAQFRIRYDAdageGGKYVVTHFVADHNHEL 160 6***************9999.666799********99988877899999************987677789************9 PP FAR1 90 a 90 a XP_028054599.1 161 A 161 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MIESRVEPYH GCKAGLSNEE ATNMNVEDGR ADVKKEMVDD AHRNDMVGNV ERAILEQKFD 60 SVKDGEDFYN AYAKAKGFSI RKSRFNTNKE GKVISRLWLC SREGQRLPKY LDRVAEKSRA 120 PKALTRVDCK AQFRIRYDAD AGEGGKYVVT HFVADHNHEL AEQHCVMYLR SHRSLNSADN 180 AQAMAMRNVG VKTSQIMDYM VNQPGSYENV GFIRTDLHNH IQAERRAEVE DGNAQGALVY 240 LCAKLDVDAR FCYKYDVCND NKLQNLFWAD SKSRADYAKF GDVLETFMEA MGNKAPVSVL 300 TDGDKAMREA IRRVFPDARH RLCNWHLGKN AVSNVHISGF AHAFKQCMDM ETDETKFEHG 360 WTTMVEEFGL QTNSWVLETY EKRHMWAEAY MRGHFFAGMK STQRSECMNA YFNPFLQHKL 420 KLYEFVRHYD RALARIRYNE AGDDAETNNT FPKIVPWVLH GKLR

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MIESRVEPYH GCKAGLSNEE ATNMNVEDGR ADVKKEMVDD AHRNDMVGNV ERAILEQKFD  60
SVKDGEDFYN AYAKAKGFSI RKSRFNTNKE GKVISRLWLC SREGQRLPKY LDRVAEKSRA  120
PKALTRVDCK AQFRIRYDAD AGEGGKYVVT HFVADHNHEL AEQHCVMYLR SHRSLNSADN  180
AQAMAMRNVG VKTSQIMDYM VNQPGSYENV GFIRTDLHNH IQAERRAEVE DGNAQGALVY  240
LCAKLDVDAR FCYKYDVCND NKLQNLFWAD SKSRADYAKF GDVLETFMEA MGNKAPVSVL  300
TDGDKAMREA IRRVFPDARH RLCNWHLGKN AVSNVHISGF AHAFKQCMDM ETDETKFEHG  360
WTTMVEEFGL QTNSWVLETY EKRHMWAEAY MRGHFFAGMK STQRSECMNA YFNPFLQHKL  420
KLYEFVRHYD RALARIRYNE AGDDAETNNT FPKIVPWVLH GKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-60	FAR1 family protein