PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054601.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 811aa MW: 93249.5 Da PI: 6.4044

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.4	8.9e-22	51	138	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 Yne+++ + Fsvr+++s++ k++++it+r+fvCskeg+r +++++ k++++ +etrtgC+a ++v ++k ++k+evt++ +HnH+l XP_028054601.1 51 IYNEFGRITSFSVRIEYSNTCKKTERITSRRFVCSKEGFRCKDNRD-IKTKKPCQETRTGCEALMTVLLNKkSKKYEVTDFFDDHNHPL 138 7***************************************9999.999**************99999************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 811 aa Download sequence
MDESMCTEAF EPPWMRDLLG PNRDGNPNLN IPDYKPRIGL EFDSLDDAKK IYNEFGRITS 60 FSVRIEYSNT CKKTERITSR RFVCSKEGFR CKDNRDIKTK KPCQETRTGC EALMTVLLNK 120 KSKKYEVTDF FDDHNHPLHI QECVHLMPSQ RKITKAQAIE ADLVEASGIR LRSSFELAFR 180 QTGGRECLGF TCQDLKNYLW TKRQRDLKFG EAGSLLVYFA DKSMKDSSFH FNMQLDVEEQ 240 ITNIFWVDPK MIIDYSVFGD FVSFDTTYRT HKGYRLLAVF LGFNNYRKNV IFGAALLYGE 300 TVASFEWLFR SFLDAMSGKK PKTFFTDQDS AMAKAISLVM PDTFHRICTW HMKQNAIKHL 360 GSKYVGDHGG IGAELSKFIY NYEDEENFCI AWEEMLDRFD VHDNSWLPTI YGVREKRAKP 420 YVMTVWSAWA DTTQHFERVV DDINHMELEC EYASRQKLPR IGLPVPMLIN TGDFYTNQNF 480 ELFKIEYLNS LRAFAWKQDE SNLSHDYMVK IPDEPMVREV KANPRGPEVS CTCRLFERCG 540 ILCSHALKGL DMMNMKEILE SYLLKRWAKK AKDGLVQENN RCVAKQVVAD LDMNARYRML 600 CLSLIKLGCR VAESKETTCM LMKNSIEMAK KIDDVLSKQA SVNEQENDSR APSCPQKSSE 660 KVAEENQPHN PHDNMPLYVP VFEDKNMDQS PLHPLSVEIP NSMSWMIPET PQAWNHLSFT 720 HLLQESLLCP SIEDSKGSSS AQYSEEVGLV TCISLEHCCV AHAYELCHED RDRNCAELSE 780 GTAGKGVGLI DKNSTFLFPF AFSSAVPYKI A

Sequence ? help Back to Top

Protein Sequence Length: 811 aa Download sequence

MDESMCTEAF EPPWMRDLLG PNRDGNPNLN IPDYKPRIGL EFDSLDDAKK IYNEFGRITS  60
FSVRIEYSNT CKKTERITSR RFVCSKEGFR CKDNRDIKTK KPCQETRTGC EALMTVLLNK  120
KSKKYEVTDF FDDHNHPLHI QECVHLMPSQ RKITKAQAIE ADLVEASGIR LRSSFELAFR  180
QTGGRECLGF TCQDLKNYLW TKRQRDLKFG EAGSLLVYFA DKSMKDSSFH FNMQLDVEEQ  240
ITNIFWVDPK MIIDYSVFGD FVSFDTTYRT HKGYRLLAVF LGFNNYRKNV IFGAALLYGE  300
TVASFEWLFR SFLDAMSGKK PKTFFTDQDS AMAKAISLVM PDTFHRICTW HMKQNAIKHL  360
GSKYVGDHGG IGAELSKFIY NYEDEENFCI AWEEMLDRFD VHDNSWLPTI YGVREKRAKP  420
YVMTVWSAWA DTTQHFERVV DDINHMELEC EYASRQKLPR IGLPVPMLIN TGDFYTNQNF  480
ELFKIEYLNS LRAFAWKQDE SNLSHDYMVK IPDEPMVREV KANPRGPEVS CTCRLFERCG  540
ILCSHALKGL DMMNMKEILE SYLLKRWAKK AKDGLVQENN RCVAKQVVAD LDMNARYRML  600
CLSLIKLGCR VAESKETTCM LMKNSIEMAK KIDDVLSKQA SVNEQENDSR APSCPQKSSE  660
KVAEENQPHN PHDNMPLYVP VFEDKNMDQS PLHPLSVEIP NSMSWMIPET PQAWNHLSFT  720
HLLQESLLCP SIEDSKGSSS AQYSEEVGLV TCISLEHCCV AHAYELCHED RDRNCAELSE  780
GTAGKGVGLI DKNSTFLFPF AFSSAVPYKI A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	565	573	KRWAKKAKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-86	FAR1 family protein