PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054622.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 213aa    MW: 24629.7 Da    PI: 6.4023
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1431.5e-1359143289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     fY +YAk++ F +  ++++ + ++ge++     C+   +r+++ +   +  +++ +++++Cka+++ +++++g++++t+++leH+H+l
  XP_028054622.1  59 FYAKYAKQLEFAIAYRTQNVT-TDGEVKYFGIECTWARNRTKRLEV--NPLEPSLSSKIDCKARVRASLQTNGRYKLTTVVLEHTHDL 143
                     9************99988877.8999*********99999988766..9999**********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSILFHFEAT MDIDSNNNSF NVSEEVEEHD NNLEFNESDE VEEPKKGMYF NSKQEVYAFY  60
AKYAKQLEFA IAYRTQNVTT DGEVKYFGIE CTWARNRTKR LEVNPLEPSL SSKIDCKARV  120
RASLQTNGRY KLTTVVLEHT HDLILTDSQH FAMNKRILTS VKRRLEVNDA AGIGVARNFH  180
SIVVEAGGYE TLMFDERDAR NYKLHVRCSP QKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195100RNRTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-15FAR1 family protein