PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054664.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 396aa MW: 44030.8 Da PI: 8.6154

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89	4.4e-28	244	295	1	52
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 k+r++W+peLH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQ XP_028054664.1 244 KARRCWSPELHRRFVNALQVLGGSQVATPKQIRELMKVDGLTNDEVKSHLQT 295 68*************************************************5 PP
2	Myb_DNA-binding	35.9	1.8e-11	246	295	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r W++e++ ++v+a + lGg t+k I + m g+t ++ks++q+ XP_028054664.1 246 RRCWSPELHRRFVNALQVLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQT 295 568***************99************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MMASPSELSL DCKPHHHSYS MLLKSLGDHT DHTQNLEDFL SQLEEERLKI DAFKRELPLC 60 MQLLTNAMET SRQQLQTYRA NQGPPRPVLE EFIPLKHSSS VYSEKANMFD LWSQASDGPK 120 PQSAKTSPKE TEIGFGGSPP KLALDNKPRN GGAFHPFSKE RKYSCPSPTL RSLPDLALAS 180 VDEEMEDKKC SEVDNGITCS RRENLGKPRT GVIEQVQGGS VQTDTQTTTV GTGTTTTTSQ 240 THRKARRCWS PELHRRFVNA LQVLGGSQVA TPKQIRELMK VDGLTNDEVK SHLQTAYQTT 300 MSQPTSCRHR TTPGSVLRRH MGPIRVRHCS SSGPRWCTTY PVWCTPYHPC LSTLLSSTTA 360 PRVLYRSTTT TIAPPHPPPP APHVQGLLTE PELPGF

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MMASPSELSL DCKPHHHSYS MLLKSLGDHT DHTQNLEDFL SQLEEERLKI DAFKRELPLC  60
MQLLTNAMET SRQQLQTYRA NQGPPRPVLE EFIPLKHSSS VYSEKANMFD LWSQASDGPK  120
PQSAKTSPKE TEIGFGGSPP KLALDNKPRN GGAFHPFSKE RKYSCPSPTL RSLPDLALAS  180
VDEEMEDKKC SEVDNGITCS RRENLGKPRT GVIEQVQGGS VQTDTQTTTV GTGTTTTTSQ  240
THRKARRCWS PELHRRFVNA LQVLGGSQVA TPKQIRELMK VDGLTNDEVK SHLQTAYQTT  300
MSQPTSCRHR TTPGSVLRRH MGPIRVRHCS SSGPRWCTTY PVWCTPYHPC LSTLLSSTTA  360
PRVLYRSTTT TIAPPHPPPP APHVQGLLTE PELPGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-74	G2-like family protein