PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054703.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 178aa    MW: 20799.9 Da    PI: 8.3927
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR176.36.1e-2435119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y++++ Fs+r+++skk+k + + ++r +vC+keg+++ ++++      + aetrtgC+a+l vk++k +gk++vt++e++HnH+l+
  XP_028054703.1  35 DFYNAYGERMRFSIRRDYSKKNKFTSQLICRLLVCNKEGFQKVNERD------PLAETRTGCEARLYVKLDKcTGKFVVTDFEEKHNHDLV 119
                     6****************************************998766......************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MAFQFRFDMD MEIENDCAWK PKQRMTFDLE QCVYDFYNAY GERMRFSIRR DYSKKNKFTS  60
QLICRLLVCN KEGFQKVNER DPLAETRTGC EARLYVKLDK CTGKFVVTDF EEKHNHDLVS  120
PKCAHMLPSQ RKITAIQAIE LDLAAQSGLR LGQSFELMGR EDGRGHCLGF TKSDKKII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-20FAR1 family protein