PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054704.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 328aa MW: 38226.9 Da PI: 8.5255

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	40.3	1e-12	49	134	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk++ F + ++++ + ++ge+ C++ +r+++++ + +++ +++++Cka+++ +++kdg++++t+++l+H+ +l XP_028054704.1 49 FYAKYAKQLRFAIAYRTQNVT-TDGEVNYFGIECTRAQNRTKRSEV--NPLEPSLSSKIDCKARVRASLQKDGRYKLTTVVLKHTDDLI 134 9**********99988877.8999*******999998866..9999******************************98775 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MDIESNNNSF NVSEEVEEHD NNLQFSESGE VEEPKKGMYF TSKQEVYAFY AKYAKQLRFA 60 IAYRTQNVTT DGEVNYFGIE CTRAQNRTKR SEVNPLEPSL SSKIDCKARV RASLQKDGRY 120 KLTTVVLKHT DDLIPTDLRH FAMNKRILTR VKRRLEVNNA GGIGVTRNFH SIVVEAGGYE 180 ALTFDERDTR NFIQNARRLK LGVGDAELVT LYFHKMQQQN SNFYSAIDLD EDGLIRNLFW 240 ADARTRAAYK AFGDKISEKL RRYSQYESIK AALSNAVYDS FTKDEFDEYW KAMIAKFNLN 300 DNEWLGVFYR ERHKWIPAYV KDIFWGSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-26	FAR1 family protein