PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028054810.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 242aa    MW: 27629.2 Da    PI: 7.6312
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028054810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.88e-0937106274
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdg 74 
                     fY +YA+++GFs+  ++++   ++g+ +    +Cs+ g+r++++k   ++ +++ +t++g kak +++ ++++
  XP_028054810.1  37 FYGKYANHIGFSIAHRAQHFG-DDGQLKYFAIKCSRVGERKKKSKV--NHLKPSLSTKIGYKAKRRLEINDQA 106
                     9*************9988776.8999***************99877..9999999999999999888777654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MEVDSISGDN PLVNEGEEVE EPKKGMCVSS RKEVYTFYGK YANHIGFSIA HRAQHFGDDG  60
QLKYFAIKCS RVGERKKKSK VNHLKPSLST KIGYKAKRRL EINDQAGIGV SRNNHSMVVE  120
AGGYKSLTFD ERDVKNYIER ARRLRLGEGD AESLQNYFMK IQAHSERFFY MIDVTYEAFG  180
DVVSFDTTYL TNKYDMPFAP FAESNHHGQF ILLGCGLLSS EDTNTFVWIF KSWLSCMSDH  240
PP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-34FAR1 family protein