PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028054932.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 601aa MW: 68835 Da PI: 8.8359

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028054932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.4	2.8e-24	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ ++++r+e rtgC+a+l++k ++ +k+ v++++++HnH ++ XP_028054932.1 31 DFYNRYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNPRQEVRTGCQARLVIKWDRnIQKFFVSDFVEQHNHIFV 119 6******************9.6666************9999.999**************99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MEPNNHENDG GECDWKPRVR MTFDTEQEVY DFYNRYGGRL GFSIRRGYVN KSKEGQITSR 60 QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP 120 TECTHMLPSQ RKISASQATE IDLAKKSGIQ LNAAFELMGN EVGGRESLGF TKLDQKNYLR 180 TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD 240 VVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGAALMYDE TADSFVWLFR RSLEAMSKVQ 300 ELQAEYALCQ NVAKGEYLSE RLWTSLQDVY TNKIFGRNFR MSNVKSLEVN IEKIENDGES 360 TVYTVLDSDG IKVRKVRQEC DDLVTCSCRK FEMKGILCSH CLKILRERLK LKEIPSQYIL 420 KRWTKKARSE NVKDRCGHDI QVDVRLHQTS RYRSLMAIFR SVAYIETMLS AKFNMPCSDT 480 IQESPPESFE VDGVADNNVV QAKGLKRREC TSKGRRRIKG GLELALAKKN KTSSYNASQT 540 SMSVTPQTPP LFSASAPEAP PLFHQSAPLF SSAPQLPPFS PSVPQVRASS SQFMYSAYDV 600 S

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MEPNNHENDG GECDWKPRVR MTFDTEQEVY DFYNRYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLTK NPRQEVRTGC QARLVIKWDR NIQKFFVSDF VEQHNHIFVP  120
TECTHMLPSQ RKISASQATE IDLAKKSGIQ LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGAALMYDE TADSFVWLFR RSLEAMSKVQ  300
ELQAEYALCQ NVAKGEYLSE RLWTSLQDVY TNKIFGRNFR MSNVKSLEVN IEKIENDGES  360
TVYTVLDSDG IKVRKVRQEC DDLVTCSCRK FEMKGILCSH CLKILRERLK LKEIPSQYIL  420
KRWTKKARSE NVKDRCGHDI QVDVRLHQTS RYRSLMAIFR SVAYIETMLS AKFNMPCSDT  480
IQESPPESFE VDGVADNNVV QAKGLKRREC TSKGRRRIKG GLELALAKKN KTSSYNASQT  540
SMSVTPQTPP LFSASAPEAP PLFHQSAPLF SSAPQLPPFS PSVPQVRASS SQFMYSAYDV  600
S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-68	FAR1 family protein