PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055030.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 197aa MW: 21917.9 Da PI: 8.7952

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055030.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152	2.9e-47	9	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptd el++++L k++g++ + + i+evd++k+ePwdLp + +++++++w fF+++d+ky++gk++nrat++gyWkatgkd++++ XP_028055030.1 9 LPVGYRFSPTDAELINHFLSSKITGNQEVV-TQIREVDLCKFEPWDLPaMsLIETNDDKWIFFCPKDSKYNNGKQSNRATRAGYWKATGKDRSIK 102 799**********************777.77***********5346777889********************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++++g+ ktL+fy+g+apkg++tdWv+hey++ XP_028055030.1 103 SVnGTTVIGTMKTLAFYTGSAPKGQRTDWVIHEYSA 138 98566679************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MPVLPLNALP VGYRFSPTDA ELINHFLSSK ITGNQEVVTQ IREVDLCKFE PWDLPAMSLI 60 ETNDDKWIFF CPKDSKYNNG KQSNRATRAG YWKATGKDRS IKSVNGTTVI GTMKTLAFYT 120 GSAPKGQRTD WVIHEYSATS EGLGGSNPGQ GSFLLFKLMK KHDKKLDRKQ DDSTEGLICN 180 EVDKNVSSSA TIISFMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	1e-66	NAC family protein