PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055066.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 531aa MW: 59152.1 Da PI: 5.1982

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	132.6	2.8e-41	9	138	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp G+rF+Ptdeel++++L+ k++g++ + ++i+ vd++++ePwdLp + +++++++w fF++++ ++++ kr nrat++gyWk tg+++ ++ XP_028055066.1 9 LPIGYRFSPTDEELINHFLRSKINGDEEAV-RHIRVVDLCNLEPWDLPgMsLIETNDNKWIFFCPKNFEHRSRKRMNRATRAGYWKVTGRNRLIK 102 699**********************877.88***********6347788999********************************9 PP NAM 94 sk.kgelvglkktLvfykgrapkg.ektdWvmheyr 127 s +++++g kktLvfy+gr+ kg +kt+Wv+hey XP_028055066.1 103 SVdGTSEIGEKKTLVFYTGRSGKGpKKTNWVIHEYC 138 9867778******9988877369******7 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MEILPLNALP IGYRFSPTDE ELINHFLRSK INGDEEAVRH IRVVDLCNLE PWDLPGMSLI 60 ETNDNKWIFF CPKNFEHRSR KRMNRATRAG YWKVTGRNRL IKSVDGTSEI GEKKTLVFYT 120 GRSGKGPKKT NWVIHEYCAS SDVLDGTNPG QGSYVLFKLI KKKLDIMQSE STEGSNRTTL 180 DTSLPIEIRV ADNVGDKSIV QDKIPEGSNR TTLDTPLPIE NCLADNAGDK SIFQDKITEG 240 SNGTTLDSPL PIENCVADNA GDKSIFQPDL DPDLLRHLVD PSLEPLDFLD KIQSPSHSLN 300 LLHVGPDPNG VLTEHLASVV AKDSGSYKNL AVESEPLNYI NLNGWVSYFD TEVPRAQFDS 360 QGSSSNSNVV SNVDTFGTGI KLRARQPRDQ TSSKNFGSQG NARRRNRLQK KLQDPSLYQS 420 NFTDLSYNEE NHEAKAEGAE EEHSVTADPD AIIDETQDTS LSKSSDVTKV AQELAWNMKS 480 RSDFPRSGDE EVPSASLKAP PALFFFFSSM HMLGVLFGRV VHCFCGFMEM R

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MEILPLNALP IGYRFSPTDE ELINHFLRSK INGDEEAVRH IRVVDLCNLE PWDLPGMSLI  60
ETNDNKWIFF CPKNFEHRSR KRMNRATRAG YWKVTGRNRL IKSVDGTSEI GEKKTLVFYT  120
GRSGKGPKKT NWVIHEYCAS SDVLDGTNPG QGSYVLFKLI KKKLDIMQSE STEGSNRTTL  180
DTSLPIEIRV ADNVGDKSIV QDKIPEGSNR TTLDTPLPIE NCLADNAGDK SIFQDKITEG  240
SNGTTLDSPL PIENCVADNA GDKSIFQPDL DPDLLRHLVD PSLEPLDFLD KIQSPSHSLN  300
LLHVGPDPNG VLTEHLASVV AKDSGSYKNL AVESEPLNYI NLNGWVSYFD TEVPRAQFDS  360
QGSSSNSNVV SNVDTFGTGI KLRARQPRDQ TSSKNFGSQG NARRRNRLQK KLQDPSLYQS  420
NFTDLSYNEE NHEAKAEGAE EEHSVTADPD AIIDETQDTS LSKSSDVTKV AQELAWNMKS  480
RSDFPRSGDE EVPSASLKAP PALFFFFSSM HMLGVLFGRV VHCFCGFMEM R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	4e-57	NAC family protein