PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055271.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 242aa    MW: 25493.3 Da    PI: 8.5014
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.001392114123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ C+k F +   L  H  +H
  XP_028055271.1  92 YKCSVCDKAFGSYQALGGHKASH 114
                     9*********9999998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MALEALNSPT AATSSFHHEN VSHRYLEQWS KGKRSKRPRM ETPPTEEEYL ALCLIMLARG  60
GAASSSTASH RSHSTPPPPP QPSTSSDSKP VYKCSVCDKA FGSYQALGGH KASHRKQAGG  120
TDDQSTTSTG TGTTTAAAIT TGGRTHECSI CHKCFPTGQA LGGHKRCHYE GGAGSAAAGG  180
SSGGVTLSEG AGSTVSHRDF DLNLPALPEF WPGFRDEEVS SPHPAKKPRF MLPPKPEISQ  240
AH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.15e-48C2H2 family protein