PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055296.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 367aa    MW: 40503.2 Da    PI: 4.6351
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-102933331055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_028055296.1 293 RRRRERINERLRILQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 333
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MEAVGAFLEE EWESLSRMFS SEEADFVAHL QGHDKRDNNS FIFGTSSPTV WPIDDEANYN  60
VNTMYGVDES FLYSSDTLGS NFHYFSQESS NSSGSNNVFF PTPSQENHCF SDSNQETNNS  120
LQSMDFGAMD MENNNSSVPF FPDNDVMGDI LYSKEEIGSD NLGNKLDGQP AIAGPGNDLP  180
QKRKIDAPKI SSDETPKKKS RVSKDAQKGK KNTTSKKNQK LTKNGSDEEE TNNGGTNGQS  240
SSCYSSEDDS NASHELKGGT NSDSKGPSAA LNSNGKTRAS RGAATDPQSL YARRRRERIN  300
ERLRILQNLV PNGTKVDIST MLEEAVHYVK FLQLQIKLLS SDDMWMYAPI AYNGMDIGLY  360
SKISPTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.13e-47bHLH family protein