PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055303.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 135aa    MW: 15498.7 Da    PI: 8.083
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.84.5e-121461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+l+ ++  +G g+W++ ++  g+ R +k+ ++rw +yl
   XP_028055303.1 14 KGAWTKEEDERLISYIGAHGEGRWRSLPNAAGLLRYGKSYRLRWINYL 61
                     79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MGRTPCCEKA HTNKGAWTKE EDERLISYIG AHGEGRWRSL PNAAGLLRYG KSYRLRWINY  60
LRPDLKHGHF TPEEDELIIN LHGLLGNNMA PAEVKRECDD YDISNETDDI RLINESRGNL  120
IMVAKLVRAI KKQPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.11e-43MYB family protein