PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055304.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 228aa    MW: 26041.9 Da    PI: 8.4502
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.86.5e-1219942190
            FAR1 21 kskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90
                    ++++ g+ ++r + Cs+eg+r  +  +  +ek+r ++a tr+gCka++++  +      + ++vt+++ +HnHela
  XP_028055304.1 19 HRNDMGKDISRLWLCSREGQRLLKYLDrvAEKSRAPKALTRVGCKAQFRIWYDAntgeGKMYVVTHFVADHNHELA 94
                    33455667889999*******99887777899999**************9877655657889************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MNVEDGRADV KKEMVDNAHR NDMGKDISRL WLCSREGQRL LKYLDRVAEK SRAPKALTRV  60
GCKAQFRIWY DANTGEGKMY VVTHFVADHN HELAEQHCVM YLRSYRSLNS ADKAQAMAMR  120
NVGIKTSQIM DYMDNKLQNP FLADSKSQAD YAKFGDVLIV DPTYRTNAYK KPFVMLAGVT  180
NHFRTTIFAC VLLANETIDT YTWVLETFME AICNKTPVSL LTDGDKAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-29FAR1 family protein