PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055418.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 214aa MW: 24514.1 Da PI: 9.8321

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.4	1.5e-20	27	114	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+Y++++GFs+r++ +k+k +++i++r fv +keg+r+ +k++ ++++r+et tgC+ +l vk++ +gk++v+++ +eHnHel+ XP_028055418.1 27 FYNAYGERMGFSTRRDCCNKNKFTKQIISRVFVDNKEGFRKVDKRD-PLTKNSRVETSTGCEVQLFVKLDVaTGKFVVSNF-KEHNHELV 114 9****************************************999.9999***************99999999999.69**97 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MDMEPNNDCG WKPKLGMPFD SKGVYCFYNA YGERMGFSTR RDCCNKNKFT KQIISRVFVD 60 NKEGFRKVDK RDPLTKNSRV ETSTGCEVQL FVKLDVATGK FVVSNFKEHN HELVSVDCAH 120 MLPSQRKISA TKAIQLELAL QSGLCLDQSF ELMGRETGGR QSLGFMKLDQ KNYLRTKRQK 180 SSAYGEGVTF DTTYKLNKEH RPFASFVRST IKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-27	FAR1 family protein