PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055430.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 870aa MW: 99483.6 Da PI: 8.1998

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.7	1.7e-22	31	120	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ +vGFs+rk + +k+k+++eit+rtfvC+keg+r +k++ + +r+e r+gC a+l +k+++ gk+ +++ ++HnH+l+ XP_028055430.1 31 DFYNNYGGKVGFSIRKLYAHKNKQTKEITSRTFVCYKEGSRGIDKRD-PLVKFPRQEVRCGCGARLSLKLDRnLGKYIAIDFIEHHNHDLV 120 6*****************************************999.88999**************9899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 870 aa Download sequence
MEENNVVDEL GSCGWKPKLG MPFDSEQAAY DFYNNYGGKV GFSIRKLYAH KNKQTKEITS 60 RTFVCYKEGS RGIDKRDPLV KFPRQEVRCG CGARLSLKLD RNLGKYIAID FIEHHNHDLV 120 REECIHMLPS QRKISTTQTI EVELASESGI PLRSAYELLG RESGGRASLG FTKLDQKNYL 180 RSKRQKDLEY GEAGSVLQYF RKKTMENPSF YYTVQLDCEQ QITNIFWADA QMIMDYAQFG 240 DVVTFDTTYK LNNEHRPFGT FVGFNHHRDT VIFGVALMYD ETVESFTWLF QNFLEAMSNN 300 APKTIFTDQD AAMAKAIPIV MPNTNHRLCT WHLMQNAVMQ NAVKHVSSLF GDVGVKGVFS 360 KFMHEIDDEE EFRIQWDQML DRYDAHNNHR LKQTFGVKDK WGWPYIMNSW AAGMSTTQLS 420 ESFNACLKDY INCDHNLMEF FTHFERVLYD KKYKELEAEY NLSQKLPRVS IPTLMLKQMA 480 DIYTKTNFEE FQNEYVQSIE ASIVGTRNDG ESTIFTIRTM VDGKKDKNVI MDTHGSLSCS 540 CKKFEVKGIV CRHCLKMLRD IFNAKDLPAQ YILKRWTKKA RVESVKDSRG YDVKVDVKLH 600 QSDRYRSLMN MFRAIASRAA ESEETYHLSL AKGEQLSVMV EDKLSVHTCG QVEVTELRNS 660 STNTCPQSDE VDCPIQAKGL KKRQATSKGR RRIKGGMEKS IAKKKRMQSN QGGSFSVSQD 720 QSQPSLSLGN HSIQGVYTTQ GQYRPPFPMG SNYVEGVYTA QGQSRPPPFV MGSNYIEGHG 780 HAIYISQSQS QSRPESQSQP PFAMGRSSVY DVMYPTYDGN NTPHSMPLVY PTHTSFQELL 840 RGTTVQLSQA SHSPADSHVD GHPWKPCTER

Sequence ? help Back to Top

Protein Sequence Length: 870 aa Download sequence

MEENNVVDEL GSCGWKPKLG MPFDSEQAAY DFYNNYGGKV GFSIRKLYAH KNKQTKEITS  60
RTFVCYKEGS RGIDKRDPLV KFPRQEVRCG CGARLSLKLD RNLGKYIAID FIEHHNHDLV  120
REECIHMLPS QRKISTTQTI EVELASESGI PLRSAYELLG RESGGRASLG FTKLDQKNYL  180
RSKRQKDLEY GEAGSVLQYF RKKTMENPSF YYTVQLDCEQ QITNIFWADA QMIMDYAQFG  240
DVVTFDTTYK LNNEHRPFGT FVGFNHHRDT VIFGVALMYD ETVESFTWLF QNFLEAMSNN  300
APKTIFTDQD AAMAKAIPIV MPNTNHRLCT WHLMQNAVMQ NAVKHVSSLF GDVGVKGVFS  360
KFMHEIDDEE EFRIQWDQML DRYDAHNNHR LKQTFGVKDK WGWPYIMNSW AAGMSTTQLS  420
ESFNACLKDY INCDHNLMEF FTHFERVLYD KKYKELEAEY NLSQKLPRVS IPTLMLKQMA  480
DIYTKTNFEE FQNEYVQSIE ASIVGTRNDG ESTIFTIRTM VDGKKDKNVI MDTHGSLSCS  540
CKKFEVKGIV CRHCLKMLRD IFNAKDLPAQ YILKRWTKKA RVESVKDSRG YDVKVDVKLH  600
QSDRYRSLMN MFRAIASRAA ESEETYHLSL AKGEQLSVMV EDKLSVHTCG QVEVTELRNS  660
STNTCPQSDE VDCPIQAKGL KKRQATSKGR RRIKGGMEKS IAKKKRMQSN QGGSFSVSQD  720
QSQPSLSLGN HSIQGVYTTQ GQYRPPFPMG SNYVEGVYTA QGQSRPPPFV MGSNYIEGHG  780
HAIYISQSQS QSRPESQSQP PFAMGRSSVY DVMYPTYDGN NTPHSMPLVY PTHTSFQELL  840
RGTTVQLSQA SHSPADSHVD GHPWKPCTER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	681	692	KKRQATSKGRRR
2	690	706	RRRIKGGMEKSIAKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-120	FAR1 family protein