PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055460.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 916aa MW: 104726 Da PI: 7.9805

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.9	6.2e-27	95	203	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkekdgkwe 77 +fY+eYAk+vGF + +++s++s+ +g++++++fvC+++g+++e+ ++ +++ r +r+ ++t+Cka+++vk+++dg+w+ XP_028055460.1 95 SFYKEYAKSVGFATIIKASRRSRISGKFIDAKFVCTRYGSKRESGTSdtpepvlnavsatsipnkRKRGRMNRSWSKTDCKACMHVKRRQDGRWV 189 5****************************************99999**********988888889******************** PP FAR1 78 vtkleleHnHelap 91 + ++ ++HnHe++p XP_028055460.1 190 IRTFIKDHNHEIFP 203 *********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 916 aa Download sequence
MGIDLEQPSR EHHKEDRLLV NVSVGDPQGE VCNRDGATLS DNAKRDKETT RQSVSGCTSN 60 SKHKVHASDG VPVNSHTNIE PYDGLEFESK EDAFSFYKEY AKSVGFATII KASRRSRISG 120 KFIDAKFVCT RYGSKRESGT SDTPEPVLNA VSATSIPNKR KRGRMNRSWS KTDCKACMHV 180 KRRQDGRWVI RTFIKDHNHE IFPDQAYYFR GHRNIDLGNS NIDALNAIRA RNKKMYVTMS 240 RQSGVVKKIS NQKSGISNSG QQILALEEGD AQAMLAHFMF MQDENPNFFY ALDLNEEQRL 300 KNVFWVDAKG RLDYGNFDDV VFFDTTYIKN EYKLPFAPFI GVNHHCQFLF LGCALIADET 360 KSTYAWVMRA WLRAMGRHAP KVILTDQDKA LKEAIAEVFP DARHCFCLWH ILTKIPEKLS 420 YVLRQHENFT TKFNKCIFTS STDEKFEKRW MKMVGRFDLG NDVWLQSLYE DRERWAPTYM 480 RDVFLAGMST TQRSESINSL FDKYMQRKTT LKEFLDQHKA ILQDKCEEEA KSDFETWHKQ 540 PGLKSPSPFG KQMAPIYTHA IFKKFQVEVL GVVACHPKKE SEDGATITFK VQDFEENQDF 600 IVVQNETTSD ISCSCRLFEY SGFLCRHVMI VLQMSGVHNI PSQYILKRWT KDAKSREIGR 660 QLSDLVDSRV RRYNDLCRCA FKLGDEGSLS QESYNIAFNA LEEALKKCES VNNSIQSVLD 720 PGSPSAHALH DFEEGTHGNM TRKTNKKNDL SRKGQVQSET EVITMGMHDN WQQMGHSNLQ 780 APTLGCSYEM QESIQGMEQL NSRVPVPTLD GYFGTQQIMQ GMGQLNAMAP SRDDYYSNQQ 840 NIQGLGQLNS IAPIHDAPYL VQQRLHGLGP LHFRPQTIQS CFDIQDSLQH MDQSDVGPTQ 900 LHGMASKHLH SKHLSR

Sequence ? help Back to Top

Protein Sequence Length: 916 aa Download sequence

MGIDLEQPSR EHHKEDRLLV NVSVGDPQGE VCNRDGATLS DNAKRDKETT RQSVSGCTSN  60
SKHKVHASDG VPVNSHTNIE PYDGLEFESK EDAFSFYKEY AKSVGFATII KASRRSRISG  120
KFIDAKFVCT RYGSKRESGT SDTPEPVLNA VSATSIPNKR KRGRMNRSWS KTDCKACMHV  180
KRRQDGRWVI RTFIKDHNHE IFPDQAYYFR GHRNIDLGNS NIDALNAIRA RNKKMYVTMS  240
RQSGVVKKIS NQKSGISNSG QQILALEEGD AQAMLAHFMF MQDENPNFFY ALDLNEEQRL  300
KNVFWVDAKG RLDYGNFDDV VFFDTTYIKN EYKLPFAPFI GVNHHCQFLF LGCALIADET  360
KSTYAWVMRA WLRAMGRHAP KVILTDQDKA LKEAIAEVFP DARHCFCLWH ILTKIPEKLS  420
YVLRQHENFT TKFNKCIFTS STDEKFEKRW MKMVGRFDLG NDVWLQSLYE DRERWAPTYM  480
RDVFLAGMST TQRSESINSL FDKYMQRKTT LKEFLDQHKA ILQDKCEEEA KSDFETWHKQ  540
PGLKSPSPFG KQMAPIYTHA IFKKFQVEVL GVVACHPKKE SEDGATITFK VQDFEENQDF  600
IVVQNETTSD ISCSCRLFEY SGFLCRHVMI VLQMSGVHNI PSQYILKRWT KDAKSREIGR  660
QLSDLVDSRV RRYNDLCRCA FKLGDEGSLS QESYNIAFNA LEEALKKCES VNNSIQSVLD  720
PGSPSAHALH DFEEGTHGNM TRKTNKKNDL SRKGQVQSET EVITMGMHDN WQQMGHSNLQ  780
APTLGCSYEM QESIQGMEQL NSRVPVPTLD GYFGTQQIMQ GMGQLNAMAP SRDDYYSNQQ  840
NIQGLGQLNS IAPIHDAPYL VQQRLHGLGP LHFRPQTIQS CFDIQDSLQH MDQSDVGPTQ  900
LHGMASKHLH SKHLSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein