PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055661.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 304aa    MW: 34777.7 Da    PI: 9.6173
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055661.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3598.2e-1916106199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+       +s++l++p  f+++++g    +   +l+d  g++W v++  +   +++++++GW++F++++ L+ g f+vFk++g+s f   vk
  XP_028055661.1  16 FFKIY--LPDQSSQCLRVPPAFVKKINGT--IPNNAKLKDHGGNVWHVEV--EEDENGVYFKNGWQRFASDHSLEFGNFLVFKYTGNSLF--DVK 102
                     56666..34445555***********777..5667***************..**********************************9999..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f k
  XP_028055661.1 103 IFGK 106
                     9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MTKRHSSRKV SFFDEFFKIY LPDQSSQCLR VPPAFVKKIN GTIPNNAKLK DHGGNVWHVE  60
VEEDENGVYF KNGWQRFASD HSLEFGNFLV FKYTGNSLFD VKIFGKNGCM KEEALANKHM  120
NEETVEKTAI SVKIEQESEE EQIRSKNIQN CKLKYSEIGM KRSVKSEGCD EVGRRKSQRI  180
ASKTIKQHGG FDASNLHFIP SVHPTAMKRS VKSEVTGSEE VSRHKSQSTP SKIIEQHTAF  240
DASEFVVPTN PHFIASLYPS ARYRLVSCWS YMRKIPFLDS GWLKMVSKWS QKWCCVIRMG  300
SCGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.16e-25B3 family protein