PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055706.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 434aa MW: 47994.6 Da PI: 7.2363

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.5	7.6e-06	330	364	16	55
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ++ L++l+ + +K + a++L +A+eYIk+L+ XP_028055706.1 330 LGDRVTALQQLVSPF-----GKTNTASVLHEAIEYIKHLH 364 555666677777776.....8*****************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MADEFQAGVC GGIWWNSPRS SLGLLSPCSA AINMQSFGWL SPPPTGTDHE QSGSVSDELV 60 VFQDIQKPHQ RETSDSRGGG VLMDSTLQMM GVGLSSSSSS SSSATTPEWK QILLGSGRSE 120 SSYHSSMLQE DMDCPQIKKE WRRSMNLKSF SDSTVNEFNQ LNQGLNSATS SNNCTVTASF 180 PMESASYGCP SKLLQTLYDT DSTPQRSLFD NRSINYLSNT NYQTNFNEIS PSLANLSTLL 240 RQQQPISPLN LTNSSQLWNS SYFPSTQAQF HASNFEEKPS FPNIIAMSNK ELVQDSGSVV 300 KKRSGEPPFK RPRIETPSPL PTFKVRKEKL GDRVTALQQL VSPFGKTNTA SVLHEAIEYI 360 KHLHNQVSVL STPYMKNGPI HHQQTCEKVR DSEGPKQDLR ARGLCLVPIS STFPVANDTT 420 ADFWTSTMFG RTFR

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MADEFQAGVC GGIWWNSPRS SLGLLSPCSA AINMQSFGWL SPPPTGTDHE QSGSVSDELV  60
VFQDIQKPHQ RETSDSRGGG VLMDSTLQMM GVGLSSSSSS SSSATTPEWK QILLGSGRSE  120
SSYHSSMLQE DMDCPQIKKE WRRSMNLKSF SDSTVNEFNQ LNQGLNSATS SNNCTVTASF  180
PMESASYGCP SKLLQTLYDT DSTPQRSLFD NRSINYLSNT NYQTNFNEIS PSLANLSTLL  240
RQQQPISPLN LTNSSQLWNS SYFPSTQAQF HASNFEEKPS FPNIIAMSNK ELVQDSGSVV  300
KKRSGEPPFK RPRIETPSPL PTFKVRKEKL GDRVTALQQL VSPFGKTNTA SVLHEAIEYI  360
KHLHNQVSVL STPYMKNGPI HHQQTCEKVR DSEGPKQDLR ARGLCLVPIS STFPVANDTT  420
ADFWTSTMFG RTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	6e-65	bHLH family protein