PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055732.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 393aa    MW: 44006.1 Da    PI: 9.918
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.12e-1375119147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_028055732.1  75 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 119
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MVSLNPNPPS QDFFIDQLKM DLPGLNSMPI ASNNNQAAGT VNANSNVNLL NSNGVWSSKD  60
LNKKVRKPYT ITKSRESWTE QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF  120
LKVQKSGKSE HVPPPRPKRK AAHPYPQKAS KKGPFQSSGA LLEPEYVLRP DSLSLPGIPI  180
NNPTLPFSNC NIMPLPPVNV SHIAKDEVGV TTPIMTPNCS SSSNNASTPR IWPTNEPNYQ  240
GKRNLNKPLR VMPDFSKVYS FIGSVFDPNA SGHLQKLKNM DPINVETVLL LMKNLSANLT  300
SPEFEDYMYH MKHRHFKTKC RTHVEHMDTS GTYGHGGNMY GTRHSGTCRH GGDKYGTCHM  360
RKMLSSCDAE KGKSNCHHSN LHMCKPENAI SSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.26e-80MYB_related family protein