PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055793.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 84aa    MW: 9746.16 Da    PI: 9.5869
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.39e-0937761146
             AP2 11 krgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaa 46
                    ++gr++A+++d  ++n    k+ ++++lg ++  eeAa+++
  XP_028055793.1 37 WTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDD-EEAAAQR 76
                    79*********999955656446**********.9999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MITKFILRLK NKDSKFMHVS SFKDNQLLSP LVILASWTGR YEAHLWDKNC WNESQNKKGR  60
QVYLGAYDDE EAAAQRQTAS LLVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79700.26e-19AP2 family protein