PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055803.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LBD
Protein Properties Length: 121aa    MW: 13289 Da    PI: 5.9563
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26060.93.4e-1915645100
          DUF260  45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                     +l++lp ++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++e
  XP_028055803.1   1 MLQELPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAE 56 
                     799************************************************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MLQELPMHQR GDAVSSMVYE ANARVRDPVY GCVGAISSLQ QQIDLLQTQL ALAQAEVVHM  60
RMRHFSLSMS SASTDSPDNN NSPPPPPSSK LMSSSHQTKS LFNMDAMVVD HPNMGESLWS  120
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31320.17e-26LBD family protein