PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028055808.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

LBD

Protein Properties

Length: 123aa MW: 13504.3 Da PI: 6.3351

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028055808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	58	2.7e-18	5	58	47	100
DUF260 47 kalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 ++lp ++r da+ss+vyeA+ar+rdPvyG+vg i++lqqq++ l+++lal+++e XP_028055808.1 5 AELPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAE 58 57899********************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence
MTRQAELPMH QRGDAVSSMV YEANARVRDP VYGCVGAISS LQQQIDLLQT QLALAQAEVV 60 HMRMRHFSLS MSSASTDSPD NNNSPPPPPS SKLMSSSHQT KSLFNMDAMV VDHPNMGESL 120 WSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	1e-23	LBD family protein