PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055818.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 258aa    MW: 28420.6 Da    PI: 7.7525
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.83.5e-19188222135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C++ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_028055818.1 188 CQHCQADKTPQWRAGPMGPKTLCNACGVRYKSGRL 222
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MEAALDRRAR FMVDDLLNFT LDAGDEDDDD ENNNNKTLKP LSSSSSSLES SKQDPDDHQT  60
LSLTEFAEEE LEWLSNKDAF PAVETCLDIL SDNPGIVQSP ASVLENSSTT STSTSNSSAT  120
TVPSCCARSI LVPVPPYPGK ARSRRRRRGF SDLPGQQWWS WSQDMVKSAK KGLPKGPPPP  180
SSTIGRKCQH CQADKTPQWR AGPMGPKTLC NACGVRYKSG RLVPEYRPAS SPTFSSVMHS  240
NSHRKIIEMR RQRYGGGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.14e-40GATA family protein