PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028055833.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 408aa    MW: 47780.2 Da    PI: 7.796
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028055833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.92.8e-073781247
            FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                    fY +YAk++GFs+  ++++   +ng+  +    Cs+ g+r+++++ 
  XP_028055833.1 37 FYGKYAKHIGFSIAHRAQHFG-DNGKLLNFAIECSRAGQRKKTSEV 81
                    9*************9988776.8999**************998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MEVDSNVGEN PLINEGEHVE EPKKGMCFSS REEVYTFYGK YAKHIGFSIA HRAQHFGDNG  60
KLLNFAIECS RAGQRKKTSE VNPSEAMFVH KNWLHNKGGY ESLTFDERDA RNYIERARRN  120
LFWADARSRA TYEAFGDVVS FDTTYLTNKY DMPFALFVGV NHHGQSILLG CGLLSSEDTN  180
TFVWLFKSWL SCMSNHPPKA IITDQCIAMQ NAIEIVFPQD RHRWFLWHIM KKIPEKLKGY  240
ARYEAIKLAM QNAVYDCLTR AEFESKWEEM LATFNLYDNE WLGVLYNERN RWVPVYVKDI  300
FWAGISTTQR SESMNALFDG YVSPKTTLKQ FVEQYDNALR NKVEKEKKAD FKSRHKLFDC  360
LTIYEFEKQF QQAYTNAKFK EVQGELKRLV YCQAVIVKEE GSISTYRW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.18e-80FAR1 family protein