PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028056010.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 209aa    MW: 23248.3 Da    PI: 6.5176
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028056010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-1055101554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  rE+ RR ++N++f eL ++l +    + +K +Ka+iL  Av+ + +L
  XP_028056010.1  55 KACREKLRRYKLNERFLELGSVLEHG---KPPKTDKAAILSDAVRMVTQL 101
                     678**********************9...99**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
METDCADNSN WLFDYGLIEG EDYTGALPAT TCFSWPSQAC DLGLKSESCS ASGSKACREK  60
LRRYKLNERF LELGSVLEHG KPPKTDKAAI LSDAVRMVTQ LRSEAQKLRE SNEDLHEKIK  120
ELKAEKNELR DEKQRLKEDK EKLEQQVKAM SAQPGFLPHP SAVPAASQGQ AAGNKLMPFI  180
GYPGVAMWQF IPSAVRDTSQ DHVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.18e-84bHLH family protein