PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056118.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 357aa MW: 40278.8 Da PI: 8.4044

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.6	9.7e-57	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv ++++++ +++ evd++kvePwdLp k+k +ekewyfF+ rdkky+tg r+nrat++gyWkatgkdke+++ XP_028056118.1 16 LPPGFRFHPTDEELITHYLSKKVLDSNFSA-TAMGEVDLNKVEPWDLPWKAKMGEKEWYFFCLRDKKYPTGLRTNRATAAGYWKATGKDKEIFR- 108 79************************99.88***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfykgrapkgekt+Wvmheyrle XP_028056118.1 109 GKSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MEDFSGLGKE DDQMELPPGF RFHPTDEELI THYLSKKVLD SNFSATAMGE VDLNKVEPWD 60 LPWKAKMGEK EWYFFCLRDK KYPTGLRTNR ATAAGYWKAT GKDKEIFRGK SLVGMKKTLV 120 FYKGRAPKGE KTNWVMHEYR LEGKFSLQNL PKTARNEWVI CRVFQKTSGG KKIHISGLVR 180 LNSIGNELGP VLPPLMDSSP YGDRTKPATS ESVHVSCFSN PIDIQKSQQE MMMIDYINNP 240 LFAASSNPSD FFPRLSLPNS VYSGPIQGNL QFPGSISMQD HAILRGLIEN YGPNMKQSLK 300 REKEMVSVSQ ETGLSNDMNT EISSVVSNIQ MGRRSFEDQG APSTSVGPAD LDYLWNY

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MEDFSGLGKE DDQMELPPGF RFHPTDEELI THYLSKKVLD SNFSATAMGE VDLNKVEPWD  60
LPWKAKMGEK EWYFFCLRDK KYPTGLRTNR ATAAGYWKAT GKDKEIFRGK SLVGMKKTLV  120
FYKGRAPKGE KTNWVMHEYR LEGKFSLQNL PKTARNEWVI CRVFQKTSGG KKIHISGLVR  180
LNSIGNELGP VLPPLMDSSP YGDRTKPATS ESVHVSCFSN PIDIQKSQQE MMMIDYINNP  240
LFAASSNPSD FFPRLSLPNS VYSGPIQGNL QFPGSISMQD HAILRGLIEN YGPNMKQSLK  300
REKEMVSVSQ ETGLSNDMNT EISSVVSNIQ MGRRSFEDQG APSTSVGPAD LDYLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-158	NAC family protein