PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028056267.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 216aa    MW: 24859.9 Da    PI: 8.055
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028056267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR153.58.1e-1749135291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fY +YAk++GF ++ ++++ +  +ge++     C++  +r+++++   +  +++ +++++Cka+++ ++++dg++++t+++leH+H+l+p
  XP_028056267.1  49 FYAKYAKHCGFAITFRSQNLT-SDGEVKYFGIECTRARFRTKRSEI--NPLEPSLSSKIDCKARVRASLQDDGRYKLTTVVLEHTHDLNP 135
                     9*************9988887.8999****************9988..8999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDIDSNNNSL NGSEEVEERD NNLYINENGE VEEPKKGMYF SSKQEVYAFY AKYAKHCGFA  60
ITFRSQNLTS DGEVKYFGIE CTRARFRTKR SEINPLEPSL SSKIDCKARV RASLQDDGRY  120
KLTTVVLEHT HDLNPTDSRH FTMNKRILTP VKRRLEVNDT VGIAVARNFH SMVVEAGGYE  180
ALTFDERDAR NYIKNARRLR LGLGDAESVT LYFYKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-19FAR1 family protein