PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056443.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 856aa MW: 98135.1 Da PI: 6.6369

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23	2.7e-07	89	127	54	91
FAR1 54 traetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +r+e r+gC+a++ +k+++ gk++ ++++++HnH+l+p XP_028056443.1 89 PRQEVRCGCHARFSIKLDRnLGKYVAIDFVEHHNHDLVP 127 7899************989*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 856 aa Download sequence
MVDGGDGNGE RLTEGHESGC DTTMAKGRES DCDEVIEENN VVNELANCGW KPKLGMSFDS 60 EQAAYDFYNT YGRNGTWGID KRDPLVKFPR QEVRCGCHAR FSIKLDRNLG KYVAIDFVEH 120 HNHDLVPQEC IHMLPSQRKI STTQAIEEEL AAESGIPLRS AYELFGRESG GRASLGFTKL 180 DQKNYLRSKR QKDLEYGEAG SVLQYFRKKS LENPSFYYAV QLDCEEQISN IFWADAQMIM 240 DYAQFGDVVT FDTTYKLNNE HRPFGTFVGF NHHRETVVFG AALMYDETTE SFTWLFQIFL 300 EHVSSLFQDV EVKGVFSKFM HQIDDEEEFK IQWDQMLDRY DAHNNHWLAQ TFGVKEKWRW 360 PYIMNYWAAG MSTTQLSESF NAFLKDYLNC DHNLMEFFKH FERVLYDKRY KELETEYNLC 420 QKLPRVSIPT VMLKQMADIY TKTIFEEFQN EYVQSIKASI VGTIHDGEST IFTIQTDVDG 480 KKDKNVTMDR DGFLSCSCKK FEVKGIVCQH YLKVLREIIN AKDLPAQYIL KRWTKKARAE 540 TVKDRRGYDV KVDVKLHQSD RYRSLMNMFR ATASRAAESE ETYHLSLAKG EELSVMVEDK 600 LSVHTFGQVE ITEFRNSSAN TCPQSDEVDC PIQAKGLKKR QATTKGRRRI KGGMEKYIAK 660 KKRMQSKQGD SFCTLEGQYE PPVAMGNISS QDGSFSTYQG QSQPSSDMGN HSMQGVYTPQ 720 GQSRPPFAMG RSNYVQGRGR ESQSQPSFAM GHTNYAEGDG RAIYISQPQS QSRPESQSQP 780 SFAMGRTSVH HVMYPTYDGN NMPQSMPFDS MPLLYPTQTS FQKLLRDSTA VQLSQASHSP 840 ADSRVDGHPW KACTER

Sequence ? help Back to Top

Protein Sequence Length: 856 aa Download sequence

MVDGGDGNGE RLTEGHESGC DTTMAKGRES DCDEVIEENN VVNELANCGW KPKLGMSFDS  60
EQAAYDFYNT YGRNGTWGID KRDPLVKFPR QEVRCGCHAR FSIKLDRNLG KYVAIDFVEH  120
HNHDLVPQEC IHMLPSQRKI STTQAIEEEL AAESGIPLRS AYELFGRESG GRASLGFTKL  180
DQKNYLRSKR QKDLEYGEAG SVLQYFRKKS LENPSFYYAV QLDCEEQISN IFWADAQMIM  240
DYAQFGDVVT FDTTYKLNNE HRPFGTFVGF NHHRETVVFG AALMYDETTE SFTWLFQIFL  300
EHVSSLFQDV EVKGVFSKFM HQIDDEEEFK IQWDQMLDRY DAHNNHWLAQ TFGVKEKWRW  360
PYIMNYWAAG MSTTQLSESF NAFLKDYLNC DHNLMEFFKH FERVLYDKRY KELETEYNLC  420
QKLPRVSIPT VMLKQMADIY TKTIFEEFQN EYVQSIKASI VGTIHDGEST IFTIQTDVDG  480
KKDKNVTMDR DGFLSCSCKK FEVKGIVCQH YLKVLREIIN AKDLPAQYIL KRWTKKARAE  540
TVKDRRGYDV KVDVKLHQSD RYRSLMNMFR ATASRAAESE ETYHLSLAKG EELSVMVEDK  600
LSVHTFGQVE ITEFRNSSAN TCPQSDEVDC PIQAKGLKKR QATTKGRRRI KGGMEKYIAK  660
KKRMQSKQGD SFCTLEGQYE PPVAMGNISS QDGSFSTYQG QSQPSSDMGN HSMQGVYTPQ  720
GQSRPPFAMG RSNYVQGRGR ESQSQPSFAM GHTNYAEGDG RAIYISQPQS QSRPESQSQP  780
SFAMGRTSVH HVMYPTYDGN NMPQSMPFDS MPLLYPTQTS FQKLLRDSTA VQLSQASHSP  840
ADSRVDGHPW KACTER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	638	649	KKRQATTKGRRR
2	647	663	RRRIKGGMEKYIAKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-91	FAR1 family protein