PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028056458.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 190aa    MW: 22469.7 Da    PI: 5.2033
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028056458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR176.64.9e-2471160189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYn+YAk  GFs+r+++ +k k+n  ++++ +vCskeg+r+++  + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH++
  XP_028056458.1  71 RFYNSYAKVKGFSIRRDQLYKDKNNM-VISKSWVCSKEGYRQSKYVEvEERKREPKQLTRVGCRACFRIKYNRsTSKYEVNEFFKEHNHSM 160
                     5********************96666.99**************998867888899****************999***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MEDNTEQNNY NIIYELDDDD GGNDGEYNIH NEDDIINSND IPTERDIKPL DELTEKDVFE  60
MTFDSEENGE RFYNSYAKVK GFSIRRDQLY KDKNNMVISK SWVCSKEGYR QSKYVEVEER  120
KREPKQLTRV GCRACFRIKY NRSTSKYEVN EFFKEHNHSM IGPLGVQFRR SHRSVTSADK  180
AQDNAMHHIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-19FAR1 family protein