PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028056484.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 218aa    MW: 24575.2 Da    PI: 9.4706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028056484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.3e-08126166954
                     HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P  a      K++ a++L +A++Y+k L
  XP_028056484.1 126 ARHRRERISERMRILQRLVPGgA------KMDTASMLDEAIHYVKFL 166
                     699*****************966......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDVELMMMQL ETLPELYGPY SSNTSQSPEL ELSGGSPTAT SSETTTTKPP LFQNPSLNSP  60
FLTNPVEESS PPRFRITQRN SNSMEAMREM IFRMAVMQPI QIDPEAVKPP KRRNVKISKD  120
PQSVAARHRR ERISERMRIL QRLVPGGAKM DTASMLDEAI HYVKFLKKQV QCLEQAGGVN  180
NNCNNYNNSV SVGFQTRPML PNVNYLKPCL LSPSSHMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.11e-45bHLH family protein