PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056608.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 209aa MW: 23577 Da PI: 9.0439

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.1	1.1e-26	52	140	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ +vGFs+rk++s+ks ++gei +rtfvCskeg r+ +k++ r +raetrtgC a +++k+ + gk++v+++++ HnH+l+ XP_028056608.1 52 EFYNSYGGRVGFSIRKEYSHKS-KSGEINTRTFVCSKEGLRKFDKRD-FAVRIPRAETRTGCGALMRIKLIRqIGKYRVINFVETHNHPLV 140 6******************9.7888*************999.9999**************9989*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MGVNHDGNLE VLDISKMDDL TIATQMDVHG KDGTQCKSIL GMEFDSKQST YEFYNSYGGR 60 VGFSIRKEYS HKSKSGEINT RTFVCSKEGL RKFDKRDFAV RIPRAETRTG CGALMRIKLI 120 RQIGKYRVIN FVETHNHPLV VSACAHMLSS QRKISTSQYI EIDLANDCGI PLRSSYELMG 180 REAGGRECVG FLKKGQEAFH THVCKSMIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-23	FAR1 family protein