PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028056795.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 304aa    MW: 34955.6 Da    PI: 6.1085
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028056795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR189.45.1e-2836124189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYneY++ vGFs+r+++ +ks+++g +t+r+fvC keg+re++k+  +  +++r+etrt+Cka ++++ ++  +kw+v+k++++HnH+l
  XP_028056795.1  36 EFYNEYGRIVGFSIRRDYCNKSQKDGVMTSRKFVCCKEGEREKDKRY-TMIKNPRSETRTNCKAFMHISVKRdLSKWVVSKFDSNHNHPL 124
                     6*******************************************999.99*******************999899*************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDDGGLEGCI EEMGELAKDK SPYLGMEFPS EEAAYEFYNE YGRIVGFSIR RDYCNKSQKD  60
GVMTSRKFVC CKEGEREKDK RYTMIKNPRS ETRTNCKAFM HISVKRDLSK WVVSKFDSNH  120
NHPLHLPQCT HLMPSQRKVC DAQGINIDIA DESGISLKAS HDLISAIAGG KEFVGFTRED  180
QKTYLCAKRQ RNLQYGETGS LLRYFQQQVA ENPYFYYAIQ LDVDEMITNI FWADHQMITD  240
YGLFGDAVSF DTTFRTNKEY RPLALFCGFN HFRMTVIFGA ALLYDETAES FETFLDAMSG  300
KKTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-61FAR1 family protein