PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028056859.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 188aa MW: 20607.6 Da PI: 9.8544

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028056859.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0016	44	66	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H XP_028056859.1 44 FECKTCNRQFPSFQALGGHRASH 66 89**********99999998887 PP
2	zf-C2H2	13.7	0.00019	96	118	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F+ L H+r+H XP_028056859.1 96 HECSICGQEFPLGQALGGHMRRH 118 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MVYLGMKRGR EEEFDTTTMA NCLMLLSHAA GGFKSRANSP SRVFECKTCN RQFPSFQALG 60 GHRASHKRLR LMGGGGLNHH QAAAGQSPQP SKPKTHECSI CGQEFPLGQA LGGHMRRHRA 120 AATPVDENNQ PPELTLSPSQ SQQEAPVVKK SNSRRILCLD LNLAPVENDF DFQLLPVLIS 180 KPLLRVGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-41	C2H2 family protein